Computational Models of the Visual System

Understanding the early visual system in health and disease is a key issue for neuroscience and neuroengineering applications such as visual prostheses.

Although the processing of visual information in the healthy retina and early visual cortex (EVC) has been studied in detail, no comprehensive computational model exists that captures the many cell-level and network-level biophysical changes common to retinal degenerative diseases and other sources of visual impairment.

To address this challenge, we are developing computational models of the retina and EVC to elucidate the neural code of vision.

Project Team

Project Lead:

Aiwen Xu

PhD Candidate

Project Affiliate:

Yuchen Hou

PhD Student

Principal Investigator:

Michael Beyeler

Assistant Professor

Project Funding

R00EY029329: Virtual prototyping for retinal prosthesis patients
PI: Michael Beyeler (UCSB)

September 2020 - August 2023
National Eye Institute (NEI)
National Institutes of Health (NIH)


We systematically incorporated neuroscience-derived architectural components into CNNs to identify a set of mechanisms and architectures that comprehensively explain neural activity in V1.

We present a biophysically detailed in silico model of retinal degeneration that simulates the network-level response to both light and electrical stimulation as a function of disease progression.

Brains face the fundamental challenge of extracting relevant information from high-dimensional external stimuli in order to form the neural basis that can guide an organism’s behavior and its interaction with the world. One potential approach to addressing this challenge is to reduce the number of variables required to represent a particular …

To investigate the effect of axonal stimulation on the retinal response, we developed a computational model of a small population of morphologically and biophysically detailed retinal ganglion cells, and simulated their response to epiretinal electrical stimulation. We found that activation thresholds of ganglion cell somas and axons varied …

Using a dimensionality reduction technique known as non-negative matrix factorization, we found that a variety of medial superior temporal (MSTd) neural response properties could be derived from MT-like input features. The responses that emerge from this technique, such as 3D translation and rotation selectivity, spiral tuning, and heading …

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